Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806806.1_cds_XP_016494546.1_8946
CDS Infomation

[gene=LOC107813759] [db_xref=GeneID:107813759] [protein=heparanase-like protein 3] [protein_id=XP_016494546.1] [location=join(58135..58362,59205..59241,59348..59531,59660..59808,60446..60676,60755..60944,61036..61161,61318..61417,61709..62077)] [gbkey=CDS]
Sequence

ATGGCTTCTTTGTTCAGCTGCTTCTTGGGGTTGTGTTTCTCGCTATTATTGTTGTACAGC
AGCCAATGTTCAAGAGCAGAAGAGGAAGAGGGGACTCTTTACATTGATGGGTCAGCAGCC
ATTGCAAAGATAGATGAGGACTTCATTTGTGCAACCTTAGATTGGTGGCCTTCTAATAAA
TGTGATTATGGAACTTGTAGCTGGGGAAATTCTTCTCTCCTTAATCTTGATCTAAGCAAC
AAGGTTTTGTTGAATGCAATTAGAGCGTTTTCTCCATTAAAAATTAGACTCGGAGGCACA
TTGCAAGACAAAATAGTATACCAAACGGCGCATTATGAGCAACCATGTAGTCCTTTTTTC
CTTAATAATACAGAGTCGTTTGGCTTCACCCAAGGTTGTTTACCTTTGTCTCGTTGGGAT
GAACTCAACGAAATCTTCAAGAAAACGGGGGCAAAAGTAACTTTTGGGTTGAATGCTTTA
AATGGAAAGACAATAGCTCCTAACGGCTCTGCTTTGGGAGATTGGGATTCCAGCAATGCA
GAGTCTTTCATCAGATATACAGTTAGCAGAGGTTATACTATCCTCGGCTGGGAGCTTGGA
AATGAATTGAATGGAAATGGAATCGGTGCAAATATCACAGCCAATCAATACAGCCGGGAT
GTCATCGCGCTTCACAAATTAATGCAAGAAATATATAAAGGGAAGGACATTATGCCATTA
GTCCTTGCACCGGGAGGAATATTTGATGTTGGTTGGTTCTCAAAGCTTATAGATAAAGCA
TCCAATTCTCTTCAAGTGGTTACACATCACATTTATAATGTTGGTGGAGGCAATGACAGC
GGCCTAGTTCAGAAAATACTTGATCCTTTTCATCTGGATGAAGACTCCAAAATATTCAGA
AATGTTCAAGGCGTTCTCCAAAATTTTGGAACTTCAGCAGTAGCATGGGTTGGTGAAAGT
GGAGGGGTTTATAACAGTGGTCGCAATCTTGTTTCCAATAGCTTTGTGTCCAGCTTTTGG
TATTTGGATCAGCTTGGGATGTCAGCCATGTTCGACACAAAGACATATTGTCGACAAACA
TTGGTTGGTGGAAACTATGGTCTCCTTAATGCCAGAACGTTTCGTCCAAATCCTGATTAT
TATGGTGCTCTTCTTTGGCACCGTTTGATGGGAAGGTCTGTTCTATCAACACAATTCCAA
GGAACGAAAAAGCTACGAGCTTACGCCCACTGTTCAAAATCTTCTGACGGAATCACACTG
TTGTTGATCAACATGGATGGTGATGCAACAGTTAATGTAAGTCTTTCCGTCACACTTGCT
AACGCAAACAAGGCTCCGCTTCTGCTGCAAGTCATAAATGGTCAGAATTCGAGACACGAA
ATTTGGAGGGAAGAATATCACCTTACAGCCAAAGATGGTGAATTACATAGCCAAACACTG
CTTTTAAATGGAAAGGAACTTAGTGTAGATCATTTTGGAAGAATCCCTCACTTGGAACCG
ATACGAGTAAAATCCTCCGAACCATTAGCTATTGCTCCTTTCTCAATTGTATTTGTTGAC
ATCCCCACTGTTCAAGTTCCTGCTTGCAGTATGTTTAAAAGTGAGTACATGTAA

Peptide Sequence

PEP ID

XP_016494546.1
PEP Infomation

PREDICTED: heparanase-like protein 3 [Nicotiana tabacum]
Sequence

MASLFSCFLGLCFSLLLLYSSQCSRAEEEEGTLYIDGSAAIAKIDEDFICATLDWWPSNK
CDYGTCSWGNSSLLNLDLSNKVLLNAIRAFSPLKIRLGGTLQDKIVYQTAHYEQPCSPFF
LNNTESFGFTQGCLPLSRWDELNEIFKKTGAKVTFGLNALNGKTIAPNGSALGDWDSSNA
ESFIRYTVSRGYTILGWELGNELNGNGIGANITANQYSRDVIALHKLMQEIYKGKDIMPL
VLAPGGIFDVGWFSKLIDKASNSLQVVTHHIYNVGGGNDSGLVQKILDPFHLDEDSKIFR
NVQGVLQNFGTSAVAWVGESGGVYNSGRNLVSNSFVSSFWYLDQLGMSAMFDTKTYCRQT
LVGGNYGLLNARTFRPNPDYYGALLWHRLMGRSVLSTQFQGTKKLRAYAHCSKSSDGITL
LLINMDGDATVNVSLSVTLANANKAPLLLQVINGQNSRHEIWREEYHLTAKDGELHSQTL
LLNGKELSVDHFGRIPHLEPIRVKSSEPLAIAPFSIVFVDIPTVQVPACSMFKSEYM

Transcript Sequence

Gene sequence data has not been registered.